Labcorp Partner Single Gene Analysis

CPT Contact CPT coding department at 800-222-7566, ext. 6-8400.
Synonyms

Carrier screening; Pan-ethnic carrier screening; Expanded carrier testing

Test Details

Turnaround Time

10 - 21 days

In some cases, additional time may be required for confirmatory or reflex tests.

 

Use

This test is used for carrier screening.

Special Instructions

Test orders must include an attestation that the provider has the patient's informed consent for genetic testing.

Test Includes

This test includes the following genes: AAAS, ABCA12, ABCA3, ABCA4, ABCB11, ABCB4, ABCC2, ABCC8, ABCD1, ABCD4, ACAD9, ACADM, ACADSB, ACADVL, ACAT1, ACOX1, ACSF3, ADA, ADAMTS2, ADAMTSL4, ADGRG1, ADGRV1, ADK, AGA, AGL, AGPAT2, AGPS, AGXT, AHCY, AHI1, AICDA, AIMP1, AIPL1, AIRE, AK2, AKR1D1, ALDH3A2, ALDH4A1, ALDH7A1, ALDOB, ALG1, ALG12, ALG13, ALG3, ALG6, ALMS1, ALOX12B, ALOXE3, ALPL, AMH, AMHR2, AMN, AMPD2, AMT, ANO10, ANO5, ANTXR2, AP1S1, AP1S2, AP3B1, AQP2, AR, ARG1, ARL13B, ARL6, ARSA, ARSB, ARSL (ARSE), ARX, ASL, ASNS, ASPA, ASS1, ATM, ATP13A2, ATP6V0A2, ATP6V0A4, ATP6V1B1, ATP6V1E1, ATP7A, ATP7B, ATP8B1, ATRX, AVPR2, B9D1, B9D2, BBS1, BBS10, BBS12, BBS2, BBS4, BBS5, BBS7, BBS9, BCKDHA, BCKDHB, BCS1L, BLM, BLOC1S3, BLOC1S6, BMP1, BMPER, BRIP1, BRWD3, BSND, BTD, BTK, C19orf12, CAD, CANT1, CAPN3, CASQ2, CASR, CAVIN1 (PTRF), CBS, CC2D1A, CC2D2A, CCDC39, CCDC8, CCDC88C, CCN6 (WISP3), CD247, CD3D, CD3E, CD3G, CD40, CD40LG, CD59, CD8A, CDAN1, CDCA7, CDH23, CEP104, CEP152, CEP290, CERKL, CERS3, CFAP408 (C8orf37), CFTR, CHAT, CHM, CHMP1A, CHRNE, CHRNG, CHST6, CIB2, CIITA, CLCF1, CLCN1, CLCN5, CLCNKB, CLN3, CLN5, CLN6, CLN8, CLP1, CLRN1, CNGA1, CNGA3, CNGB1, CNGB3, CNTNAP2, COA8 (APOPT1), COASY, COL11A2, COL17A1, COL27A1, COL4A3, COL4A4, COL4A5, COL7A1, COLQ, COQ4, CORO1A, COX10, COX15, COX20, COX6B1, CP, CPLANE1, CPS1, CPT1A, CPT2, CRADD, CRB1, CRLF1, CRTAP, CTC1, CTNS, CTSA, CTSC, CTSD, CTSF, CTSK, CUL4B, CUL7, CWC27, CYBA, CYBB, CYP11A1, CYP11B1, CYP11B2, CYP17A1, CYP19A1, CYP1B1, CYP21A2, CYP27A1, CYP27B1, CYP4F22, CYP7B1, DBT, DCAF17, DCLRE1C, DCX, DDB2, DDC, DDR2, DDX11, DGAT1, DGUOK, DHCR24, DHCR7, DHDDS, DKC1, DLAT, DLD, DLG3, DLL3, DMD, DNAAF19 (CCDC103), DNAH11, DNAH5, DNAI1, DNAI2, DNAL1, DNMT3B, DOCK8, DOK7, DOLK, DTNBP1, DUOX2, DUOXA2, DYNC2H1, DYSF, EDA, EFEMP2, EIF2AK3, EIF2B1, EIF2B2, EIF2B3, EIF2B4, EIF2B5, ELP1, EMD, EPB42, EPG5, ERBB3, ERCC2, ERCC3, ERCC4, ERCC5, ERCC6, ERCC8, ESCO2, ETFA, ETFB, ETFDH, ETHE1, EVC, EVC2, EXOSC3, EYS, F7, F9, FA2H, FAH, FAM161A, FANCA, FANCB, FANCC, FANCD2, FANCE, FANCF, FANCG, FANCI, FANCL, FBP1, FBXL4, FBXO7, FGD1, FH, FHL1, FKBP10, FKRP, FKTN, FMO3, FMR1, FOLR1, FOXN1, FOXP3, FOXRED1, FRAS1, FREM2, FTCD, FTSJ1, FUCA1, G6PC1 (G6PC), G6PC3, GAA, GALC, GALE, GALK1, GALNS, GALNT3, GALT, GAMT, GATM, GBA1 (GBA), GBE1, GCDH, GCH1, GDAP1, GDF5, GFM1, GFPT1, GHR, GHRHR, GJB1, GJB2, GLA, GLB1, GLDC, GLE1, GNE, GNPAT, GNPTAB, GNPTG, GNRHR, GNS, GORAB, GPHN, GPR143, GRHPR, GRIP1, GSS, GUCY2D, GUSB, GYS2, HADH, HADHA, HADHB, HAMP, HAX1, HBA1, HBA2, HBB, HCFC1, HELLS, HEXA, HEXB, HGSNAT, HINT1, HJV, HLCS, HMGCL, HMGCS2, HMOX1, HOGA1, HPD, HPRT1, HPS1, HPS3, HPS4, HPS5, HPS6, HSD17B10, HSD17B3, HSD17B4, HSD3B2, HSD3B7, HYAL1, HYCC1 (FAM126A), HYLS1, IDH3B, IDS, IDUA, IFT140, IGHMBP2, IGSF1, IKBKB, IL1RAPL1, IL2RA, IL2RG, IL7R, INPP5E, INVS, ITGA2B, ITGA6, ITGB3, ITGB4, ITPA, IVD, IYD, JAK3, KCNJ1, KCNJ11, KCTD7, KDM5C, KIF14, L1CAM, LAMA2, LAMA3, LAMB3, LAMC2, LAMP2, LARGE1, LARS1 (LARS), LCA5, LCK, LDLR, LDLRAP1, LHCGR, LHX3, LIFR, LIG4, LIPA, LMAN1, LMBRD1, LOXHD1, LPAR6, LPL, LRAT, LRP2, LRPPRC, LTBP4, LYST, MAK, MALT1, MAN2B1, MANBA, MCCC1, MCCC2, MCEE, MCOLN1, MCPH1, MECP2, MECR, MED17, MEFV, MEGF8, MESP2, MFSD8, MID1, MKKS, MKS1, MLC1, MLYCD, MMAA, MMAB, MMACHC, MMADHC, MMUT (MUT), MOCS1, MOCS2 (MOCS2A/B), MPI, MPL, MPV17, MRE11, MTHFD1, MTHFR, MTM1, MTMR2, MTR, MTRR, MTTP, MUSK, MVK, MYO15A, MYO7A, NAGA, NAGLU, NAGS, NBAS, NBEAL2, NBN, NCF2, NCF4, NDP, NDRG1, NDUFA11, NDUFAF2, NDUFAF5, NDUFS4, NDUFS6, NDUFS7, NDUFV1, NEB, NEU1, NGLY1, NHEJ1, NIPAL4, NONO, NPC1, NPC2, NPHP1, NPHP3, NPHS1, NPHS2, NR0B1, NR2E3, NSMCE3, NTRK1, OAT, OBSL1, OCA2, OCRL, ODAD3 (CCDC151), OPA3, OPHN1, OSTM1, OTC, OTOA, OTOF, P3H1, PAH, PAK3, PANK2, PC, PCBD1, PCCA, PCCB, PCDH15, PCNT, PDE6A, PDHA1, PDHB, PDHX, PDP1, PEPD, PET100, PEX1, PEX10, PEX11B, PEX12, PEX13, PEX14, PEX16, PEX19, PEX2, PEX26, PEX3, PEX5, PEX6, PEX7, PFKM, PGK1, PGM3, PHF8, PHGDH, PHKA1, PHKA2, PHKB, PHKG2, PHYH, PIGN, PIP5K1C, PJVK (DFNB59), PKHD1, PLA2G6, PLEKHG5, PLOD1, PLOD2, PLP1, PMM2, PNP, PNPLA1, PNPO, POC1A, POLG, POLH, POLR1C, POMGNT1, POMT1, POMT2, POR, POU1F1, POU3F4, PPIB, PPT1, PQBP1, PRCD, PRDM5, PRF1, PRICKLE1, PRKDC, PROP1, PRPS1, PSAP, PTPRC, PTS, PUS1, PYCR1, PYGL, PYGM, QDPR, RAB23, RAG1, RAG2, RAPSN, RARS2, RAX, RD3, RDH12, RDH5, RFX5, RFXANK, RFXAP, RHAG, RLBP1, RMRP, RNASEH2A, RNASEH2B, RNASEH2C, ROGDI, RP2, RPE65, RPGR, RPGRIP1, RPGRIP1L, RPS6KA3, RS1, RSPH9, RTEL1, RXYLT1, RYR1, SACS, SAG, SAMD9, SAMHD1, SARS2, SCO1, SCO2, SDCCAG8, SDR9C7, SEC23B, SELENON, SEPSECS, SERPINF1, SGCA, SGCB, SGCD, SGCG, SGSH, SH3TC2, SKIC2 (SKIV2L), SKIC3 (TTC37), SLC12A1, SLC12A3, SLC12A6, SLC16A2, SLC17A5, SLC19A2, SLC19A3, SLC1A4, SLC22A5, SLC25A13, SLC25A15, SLC25A20, SLC26A2, SLC26A3, SLC26A4, SLC27A4, SLC2A10, SLC2A2, SLC34A3, SLC35A3, SLC37A4, SLC38A8, SLC39A4, SLC3A1, SLC45A2, SLC46A1, SLC4A1, SLC4A11, SLC5A5, SLC6A19, SLC6A8, SLC7A7, SLC7A9, SMARCAL1, SMN1, SMPD1, SNAP29, SNX10, SP110, SPATA7, SPG11, SPG21, SPG7, SPINK5, SPR, SRD5A2, ST3GAL5, STAR, STK4, STX11, STXBP2, SUCLA2, SUMF1, SUOX, SURF1, SYN1, SYNE4, TAFAZZIN (TAZ), TANGO2, TAT, TBCD, TBCE, TBX19, TCIRG1, TCN2, TCTN1, TCTN2, TCTN3, TECPR2, TERT, TF, TG, TGM1, TH, THOC2, TK2, TMC1, TMEM138, TMEM216, TMEM231, TMEM237, TMEM38B, TMEM67, TMEM70, TMPRSS3, TNFSF11, TNXB, TPO, TPP1, TRAPPC11, TRDN, TREX1, TRHR, TRIM32, TRIM37, TRMU, TRPM6, TSEN2, TSEN54, TSFM, TSHB, TSHR, TTC7A, TTC8, TTPA, TULP1, TYMP, TYR, TYRP1, UBR1, UNC13D, UNG, UPF3B, USH1C, USH1G, USH2A, VDR, VLDLR, VPS11, VPS13A, VPS13B, VPS45, VPS53, VRK1, VSX2, WAS, WHRN, WNT1, WNT10A, WRN, XPA, XPC, ZAP70, ZBTB24, ZDHHC9, ZFYVE26, ZNF469, ZNF711, BCHE, F11, F2, F5, G6PD, GP1BA, GP9, HFE, HGD, SERPINA1, TFR2, ACADS, AFF2, F8, FXN and MAT1A.

Limitations

Technologies used do not detect germline mosaicism and do not rule out the presence of large chromosomal aberrations including rearrangements and gene fusions, or variants in regions or genes not included in this test, or possible inter/intragenic interactions between variants or repeat expansions.

Variant classification and/or interpretation may change over time if more information becomes available. Updated classifications are available upon request. False positive or false negative results may occur for reasons that include: rare genetic variants, sex chromosome abnormalities, pseudogene interference, blood transfusions, bone marrow transplantation, somatic or tissue-specific mosaicism, mislabeled samples or erroneous representation of family relationships.

This test was developed and its performance characteristics determined by Labcorp. It has not been cleared or approved by the Food and Drug Administration.

Methodology

Next-generation sequencing: identifies genetic variants, including single nucleotide variants (SNVs), insertions, deletions and copy number variants (CNVs).  

Fragile X syndrome: cytosine-guanine-guanine (CGG) triplet repeats in the 5' untranslated region (5' UTR) of the FMR1 gene are detected by triplet repeat-primed PCR (RP-PCR) with fluorescently labeled primers followed by capillary electrophoresis.

Confirmation of the presence and location of reportable variants is performed as needed based on stringent criteria using one of several validated orthogonal approaches.1

References

Gregg AR, Aarabi M, Klugman S, et al. Screening for autosomal recessive and X-linked conditions during pregnancy and preconception: a practice resource of the American College of Medical Genetics and Genomics (ACMG). Genet Med. 2021 Oct;23(10)1793-1806. PubMed 34285390

Guha S, Reddi HV, Aarabi M, et al. Laboratory testing for preconception/prenatal carrier screening: A technical standard of the American College of Medical Genetics and Genomics (ACMG). Genet Med. 2024 Jul;26(7):101137. PubMed 38814327

Specimen Requirements

Information on collection, storage, and volume

Specimen

Whole blood or Oragene Dx 500 saliva kit

Volume

4 mL whole blood or Oragene Dx saliva kit

Minimum Volume

3 mL whole blood or Oragene Dx saliva kit

Container

Lavender-top (EDTA) tube or Oragene Dx 500 Saliva Collection Kit

Storage Instructions

Maintain specimen at room temperature or refrigerate at 4°C. Do not freeze.

Causes for Rejection

Frozen or hemolyzed specimen; quantity not sufficient for analysis or in improper container; specimen from an individual who has undergone allogeneic bone marrow transplant

Collection

Standard phlebotomy; follow Oragene Dx 500 Saliva Collection Kit instructions. Do not eat, drink, smoke or chew gum 30 minutes prior to collection.